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 Pooled
 brain
lung
thyroid
spleen
stomach
kidney
cervix
heart
lymphNode
placenta
uterus
bladder
breast
prostate
liver
pancreas
smallIntestine
thymus
adipose
skeletalMuscle
ovary
testicle
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| Gene id: |
uc003qht.2 |
| Gene name: |
PERP |
| Chromosome: |
chr6(-) |
| Gene locus: |
chr6:138409641-138428660 |
| Gene description: |
Homo sapiens PERP, TP53 apoptosis effector (PERP), mRNA. |
| Notes: |
|
| Start codon: |
138428475 |
| Stop codon: |
138413179 |
| Alternative polyA sites: |
Mapped to the searched transcript,
containing the 5' and 3' flanking region of 1kb. |
|
138413053, 138412865, 138412260, 138411981, 138411927, 138411843, 138409644 |
| polyA signals: |
ATTAAA, none, AATAAA, none, AATAAA, ATTAAA, AATAAA |
Tips for marking poly(A) sites in the corresponding genome sequence:
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All the heterogeneous cleavage sites clustered to a poly(A) site, are underlined and highlighted in light red, and their upstream poly(A) signals if exists, are highlighted in light green.
Especially, the most-frequently used cleavage site defined as the reference poly(A) site in a cluster, is specially highlighted in dark red and underlined in bold.
Also, the searched transcript locus is indicated, including the marked exons (light grey background with a brown font), introns and UTRs (light grey background with a green font).
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> uc003qht.2; PERP, Homo sapiens PERP, TP53 apoptosis effector (PERP), mRNA.
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End | 
in 3'UTR |
in 3'UTR |
in 3'UTR |
in 3'UTR |
in 3'UTR |
in 3'UTR |
in 3'UTR |
StopCodon | StartCodon | Start | |
| PolyA
sites and polyA signals mapped to the searched transcript,
including the 5' and 3' flanking region of 1kb |
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| PolyA sites used in human (Homo spaiens) normal 22 tissues. White man,
Reads bar break at 100 reads. Mean reads: 536. |
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|
| Gene id: |
uc003qht.2 |
| Gene name: |
PERP |
| Chromosome: |
chr6(-) |
| Gene locus: |
chr6:138409641-138428660 |
| Gene description: |
Homo sapiens PERP, TP53 apoptosis effector (PERP), mRNA. |
| Notes: |
|
| Start codon: |
138428475 |
| Stop codon: |
138413179 |
| Alternative polyA sites: |
Mapped to the searched transcript,
containing the 5' and 3' flanking region of 1kb. |
|
138413053, 138412865, 138412260, 138411981, 138411927, 138411843, 138409644 |
| polyA signals: |
ATTAAA, none, AATAAA, none, AATAAA, ATTAAA, AATAAA |
Tips for marking poly(A) sites in the corresponding genome sequence:
|
|
All the heterogeneous cleavage sites clustered to a poly(A) site, are underlined and highlighted in light red, and their upstream poly(A) signals if exists, are highlighted in light green.
Especially, the most-frequently used cleavage site defined as the reference poly(A) site in a cluster, is specially highlighted in dark red and underlined in bold.
Also, the searched transcript locus is indicated, including the marked exons (light grey background with a brown font), introns and UTRs (light grey background with a green font).
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