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Analysis of genomic poly(A) sites
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Branchiostoma belcheri
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Annotated genes matched the keyword: 'caspase'    total: 37      *click 'View'-labled button to detail genes in a new page [Help]  

 Detail *   id   gene_id/transcript_id (Link other resources)   gene name (sympol)  locus (link view in Gbrowse)   descriptions & notes 
1 Bb_008400R CASP10  Sc0000001(-):3186009-3192797 caspase-10 
2 Bb_008390R casp3a  Sc0000001(-):3175568-3181522 caspase 3, apoptosis-related cysteine protease a 
3 Bb_088060F CAD  Sc0000042(+):1170052-1174431 caspase-activated DNase 
4 Bb_084600F   Sc0000040(+):748551-750372 caspase 9, apoptosis-related cysteine protease 
5 Bb_083320R casp9  Sc0000039(-):710923-719008 caspase 9, apoptosis-related cysteine protease 
6 Bb_071920F CARD11  Sc0000030(+):309359-328352 caspase recruitment domain family, member 10 
7 Bb_066660F CASP2  Sc0000026(+):457132-460191 caspase-2 
8 Bb_064330R CASP2  Sc0000024(-):1416230-1417308 caspase-2 
9 Bb_055410R NLRC3  Sc0000019(-):1513529-1518156 caspase 9, apoptosis-related cysteine protease 
10 Bb_056090F casp9  Sc0000019(+):2148571-2156161 caspase 9, apoptosis-related cysteine protease 
11 Bb_050110R casp9  Sc0000016(-):1759798-1772291 caspase 9, apoptosis-related cysteine protease 
12 Bb_050100R casp9  Sc0000016(-):1744487-1755582 caspase 9, apoptosis-related cysteine protease 
13 Bb_046380F Casp7  Sc0000014(+):1527789-1531199 caspase
14 Bb_030730R CASP3  Sc0000007(-):2320546-2324292 caspase-3 
15 Bb_291070F CASP8  Sc0000888(+):44170-48889 caspase-8 
16 Bb_280950F LRDD  Sc0000728(+):45785-56278 caspase 9, apoptosis-related cysteine protease 
17 Bb_277390F casp8l1  Sc0000679(+):79505-82377 caspase 8, apoptosis-related cysteine peptidase, like 1 
18 Bb_253230F CASP2  Sc0000448(+):113177-122354 caspase-2 
19 Bb_249950R CASP10  Sc0000424(-):14294-17165 caspase-10 
20 Bb_246980F casp9  Sc0000405(+):121763-135389 caspase 9, apoptosis-related cysteine protease 
21 Bb_024000R Casp7  Sc0000005(-):3713168-3718316 caspase
22 Bb_238950F caspc  Sc0000356(+):34347-35791 caspase
23 Bb_230480F CASP9  Sc0000313(+):57262-62838 caspase-9 
24 Bb_220400R Casp8  Sc0000272(-):165038-167763 caspase
25 Bb_176160F O93415  Sc0000150(+):62763-65523 caspase-6 
26 Bb_173580R roco4  Sc0000145(-):160622-165988 caspase 2, apoptosis-related cysteine protease 
27 Bb_166640F caspc  Sc0000132(+):720957-725328 caspase
28 Bb_166620F caspc  Sc0000132(+):711422-714604 caspase
29 Bb_166590F caspc  Sc0000132(+):698029-701474 caspase
30 Bb_140920R caspa  Sc0000098(-):248777-253272 caspase
31 Bb_134270R casp7  Sc0000089(-):318086-322760 caspase 7, apoptosis-related cysteine peptidase 
32 Bb_134280F casp7  Sc0000089(+):326005-331107 caspase 7, apoptosis-related cysteine peptidase 
33 Bb_130940F CASP2  Sc0000085(+):496479-500495 caspase-2 
34 Bb_117000F Casp8ap2  Sc0000070(+):871095-881736 caspase 8 associated protein 2 
35 Bb_112340F CASP10  Sc0000065(+):1141818-1147070 caspase-10 
36 Bb_111540F casp9  Sc0000065(+):151091-167736 caspase 9, apoptosis-related cysteine protease 
37 Bb_106840F CASP10  Sc0000060(+):727305-731037 caspase-10 
*click 'View'-labled button to detail the corresponding gene in a new page. clicking '+' icon quickly overviews the gene mapping.

(Leiming You, et al. Nucleic Acids Res. 2015, 43: D59-D67) APASdb: a database describing alternative poly(A) sites and selection of heterogeneous cleavage sites downstream of poly(A) signals.

May 27, 2016. last modified
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