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Analysis of genomic poly(A) sites
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Sequence obtained by querying the dataset: Proteins/B.belcheri_HapV2(v7h2)_proteins
Strand:  Forwstrand Revcstrand  Display:  Fasta Numbered
Current detected sequences from to

>Bb_327720R:1-879 xfSc0000475:7121-9763(-) tlr22

 Link to be detailed in other pages:
 [transcript: Bb_327720R] [APASdb: Alternative polyadenylation sties] [Gbrowser: Mapping view

 InterPro protein Families and Domains annotation matched:
 
 InterPro/Pfam Id  Locus  E-value  Description
  IPR001611  83-134  5.2E-11  Leucine-rich repeat
  IPR001611  149-207  1.7E-6  Leucine-rich repeat
  IPR001611  280-339  6.8E-11  Leucine-rich repeat
  IPR001611  353-375  0.08  Leucine-rich repeat
  IPR001611  532-578  3.4E-11  Leucine-rich repeat
  IPR000157  727-868  2.3E-24  Toll/interleukin-1 receptor homology (TIR) domain

MSQLWLFVCVLLGHSAWKYGVSAVRNDAFPCWNFNTTFVDCSELDLESVPLLPQETIALDFSDNRIHTLANDSFHGLDNLLQLKLCTNGITSMEDQAFAN
LQQLEELNLKENPLVYIRPEVLLPLQSLRKLDLSTARLMAIPEALRMLPNLQDVNLGRNDITSASLDIFRGMSKIQTISLQGNYIKNISASDFSILKNKS
LHALSLSATVESLSHIQERALNALKTVQELDLSDIEVQGGVREFWAYTSELSYGTVKYLNFIHMRLNIYQNDFFYFLPQTVEELLLDLNYIFTLKRQSFA
ELKNLQVLRLSQCWMSSIEIGAFDGLENLKELHLSGNKLSALDSHVLSPISGSLEVLNLGNNINFQLHPGNLKNLTVLKILALQNTGIRSLEDDHFEDLG
NLIQLDISFLQADYKPTKEGIFRYIFNLEVFLAKKNGRTFFELDAILSAGLDSLRVIDLDSGGSNILNDRGRTVNVLDLQVLRVTNSAFDVQPYAYNYRA
DLFWNLTELLEIDLSQNGFQGIKKEAFWHLKKLDTLKLAGNYLASLHPSMFRDANSLRVLDLSYNRLTTVSPKLFQHVHVYSLRQLYMQNNLITSIGPQT
LKYWNILYKLDLSENPFSCTCQLLDFVVWGRNNTSVRIMYYYSTSGFKYYMCSSPPDMKNLPLIDYKPDCKSYTGYYMCIVMSTLVFLYTTLTYVIVKYH
AYIRYLYQYARGKLRGYQAIPYRNRYEYDVFVSYNSEDIRWVQQELIPNLEEAEPHYRLCIGDRDFLAGRDITTNIVEAIQGSRKTLCLLTRRFVRSGWC
TLEFKIAQHRLFEEGQDVLVLVLLEDIPAHVVQRYNRLRQLMSRKTYLVWPEDQQARPLFWVRLRKALGAGNVLPNEED


 
May 19, 2019. Last updated  
Copyright© Laboratory of Molecular Medicine, Sun Yat-Sen University, High Education Mega Center, Guangzhou 510006 China.