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Analysis of genomic poly(A) sites
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Sequence obtained by querying the dataset: Proteins/B.belcheri_HapV2(v7h2)_proteins
Strand:  Forwstrand Revcstrand  Display:  Fasta Numbered
Current detected sequences from to

>Bb_314330R:1-960 Sc0001700:4854-7739(-) tlr22

 Link to be detailed in other pages:
 [transcript: Bb_314330R] [APASdb: Alternative polyadenylation sties] [Gbrowser: Mapping view

 InterPro protein Families and Domains annotation matched:
 
 InterPro/Pfam Id  Locus  E-value  Description
  IPR001611  72-125  1.0E-12  Leucine-rich repeat
  IPR001611  405-451  8.1E-12  Leucine-rich repeat
  IPR001611  497-553  1.3E-8  Leucine-rich repeat
  IPR001611  616-675  9.6E-15  Leucine-rich repeat
  IPR000157  861-941  4.0E-12  Toll/interleukin-1 receptor homology (TIR) domain

MESKPTPLAVCLAVVSVFIAQHGRVRGQLPPPVCQTWNSTTVVCKGDPDWRYYPTRAPLTQVPPGIPESVITVDLSWNNITVLYNDSFSGLRNLRSLDLS
DNPIQAIEVGAFAGLEKLQVLDIGNSYLGITEQMYPLHNGMFQDLRNLNYLAVVTYTDTVASEGVFTGLSKLSYLRLGVKNISNLPDHMFDPLTSLESLI
ILEVGEDSEPEDLYTTMRRVRSGSGFLQRRLLWAPLNNLTRLTLCNLPRVSDFYFGPVFTKMSRLETIYILSLGEQTFPKISAQMLRPLLPTVKHLRTET
RIAPGLLKSLTHLQTLDLFHASYLDTMDVLPELRHTQIQELSLDDLITDKLTSDTLAGIKGLKTLKTMILDNGDIVAIGIEANAFAGLSHLQRLDLTRVA
LETLTLHDKAFSGLSSLTHLNLTQSMISTLPQYVFEGLSSLTHLDLSQNKLETSHAQLPETMDYLDLSQNKLHNNRDTGQWPCSYPISFNFSGIKSVNHL
NLSHNEIEVVPVDCFPRNITVLDLQNNRLGHAEVAYSRCIESLRYLDLSNNELGQTIEYGFPICGRLGMETLKLDNNGMTDIQGIPEGMMISLKTLTLSH
NQIQRIKTGQLTRSDQLEHLDLSHNEINTVMPFAFRGLSRLQFLDLSNNKIKNITMSTFEGLGNLTHLNLEANRIPVIGDAFQRLYGLRHLNLSSNWLTV
LNQTTLSPVLIRLETIDIADNPFLCDCKLMWFVEWALDKYDRVANLHNPYPDVGRGYTCSRPAHLSGRRLIDGLTQKQQSKDRQDPSERKFFDIVCSHGF
RPNRLLACVLASSGIFVAMTTIFLVDYHVGRVQYYLWMLDKWRRPKIGEVKNQGPHRYTHDAFLAYNNRDVWWVIHEAIENLEPDYSLVIHERDFAVGAP
IVENIADAVENSRRTVCLITRNFLKSKWCEYEFQLAQYHMFEEGEGGVSSWCFWRGFLTK


 
May 27, 2016. last modified
 
Copyright © Laboratory of Molecular Medicine, Sun Yat-Sen University, High Education Mega Center, Guangzhou 510006 China.