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Analysis of genomic poly(A) sites
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Sequence obtained by querying the dataset: Proteins/B.belcheri_HapV2(v7h2)_proteins
Strand:  Forwstrand Revcstrand  Display:  Fasta Numbered
Current detected sequences from to

>Bb_210760F:1-1190 210760F_115330_in Sc0000236:159608-163767(+) tlr22 toll-like receptor 22

 Link to be detailed in other pages:
 [transcript: Bb_210760F] [APASdb: Alternative polyadenylation sties] [Gbrowser: Mapping view

 InterPro protein Families and Domains annotation matched:
 
 InterPro/Pfam Id  Locus  E-value  Description
  IPR001611  135-188  3.4E-13  Leucine-rich repeat
  IPR026906  194-264  0.0022  Leucine rich repeat 5
  IPR001611  472-530  2.9E-14  Leucine-rich repeat
  IPR001611  684-730  1.9E-12  Leucine-rich repeat
  IPR001611  736-793  1.1E-9  Leucine-rich repeat
  IPR000157  956-1094  6.7E-19  Toll/interleukin-1 receptor homology (TIR) domain

MKPYMCRILRTYVTLTKRSVAYSTVYIPDFPPQHVLLFSESDPNPSDSEVHTKTNQTKQLKNMESTPALLAVCLAVVSAFIAQHGQVRGQLPPPVCQTWN
STTVVCTGVYNPWYEKSDKALLTEVPPGIPKSVITVELTKNNITELYNFSFSGLRNLRHLVLYRNNLQTIEVGTFAGLENLEHLDLRGWIVPVPNPLFSL
QNGLFQDLRNLNYLAVMTLTDSVSEGVFRGLSKLTHLELTVKNSSNFPDHIFDSLTSLESIDIREFCRPSPVIHSGSKFLLRRLLWEPLYKLKKLKVYFC
LPRVGDMYFGPVFKNLSKLQTVEISFSMHPPSFTVQMFQPLLLTLKHLLLGEGRKLEPGLLKSLTHLQTMDLRQLLDANIMDILPELEYTQIQKLYMSFS
MQQINKTITSDTLAGIEGLKYLKDLFLNLGYSDFRGIKSNAFAGLQRIQKLDFFLGRLAILPNKTFSGLSSLTHLNLSYNHVFTLRQGVFQGLFSLTHLD
LAHNSISTLPRGIFEDLTSLTHLDVSKNELVTSQAQLPETMDYLDLSQNNLNSRYEREKQWICRNPVSFNFSGLNSVNHLNLSHNAITVVDGGCLPWHSY
AMFIVHVIDLSHNNIGILDTEIYCMVYLQYLDLSFNRINSFDNYGLPCGQSTLVTLRLDNNAIQRIILDHVDYLLSPQPKSLINLKTLTLSQNRIQRIET
GQFSRLVRLEHLDLSHNEINTVMPSAFRGLYDNVSRLTFLDLSDNQIQTVTMMTFDGLKNLRHLNLAANRIAEIGNALNHLYMLRNLILSRNRMAVLNQT
TLGPVVYRVETIDIADNPFLCDCNLMWFVEWAQQKYDRVPNLYNPYPDFGRSYNCSLPARLRGRRLIEGLMQKEQPNDRNDPSERMFFDTDCSHGFRPNR
LLACVLASSGIFLTMMTIFLVDYNIGRVQYYLWMLAKWRRPGIGEVRNQEPPRYTHDAFLAYNNRDVRWVIHEAIENLEPEYSLVIHERDFAVGAPIVEN
IADAVTNSRRTVCLITRNFLKSKWCEYEFQLAQYHMFEEGGGVRLILVLLERIPDQMLKRFRHLNAVIKRDTYLTWPHDVRKRPLFWRRLRDALGDPLPR
DPDPQLHGQDQERNIPEQEPQAPGRNIPEQQARAPIRIIPEQQEQARARNIAEVQVHGPMQNIQEVQDEIPLRDANYQWFEDEDDMPLLP


 
May 19, 2019. Last updated  
Copyright© Laboratory of Molecular Medicine, Sun Yat-Sen University, High Education Mega Center, Guangzhou 510006 China.