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Analysis of genomic poly(A) sites
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Sequence obtained by querying the dataset: Proteins/B.belcheri_HapV2(v7h2)_proteins
Strand:  Forwstrand Revcstrand  Display:  Fasta Numbered
Current detected sequences from to

>Bb_005250F:1-1460 Sc0000000:7124924-7136080(+) tlr22

 Link to be detailed in other pages:
 [transcript: Bb_005250F] [APASdb: Alternative polyadenylation sties] [Gbrowser: Mapping view

 InterPro protein Families and Domains annotation matched:
 
 InterPro/Pfam Id  Locus  E-value  Description
  IPR001611  76-132  2.6E-16  Leucine-rich repeat
  IPR001611  258-300  2.3E-6  Leucine-rich repeat
  IPR000157  400-546  3.0E-23  Toll/interleukin-1 receptor homology (TIR) domain
  IPR000906  824-911  4.8E-25  ZU5 domain
  IPR000488  1148-1215  2.2E-7  Death domain

MRTRPVLLLCVCLAVVQHRAVTGTASVLTHGDIHVASATSCTERLANVSDVTGVAVDCSRGNFSAVPTNISSLSVVLDLKHNRLRSVNRDSFNGLVSLKV
LNLSYNQISTIEHGSFTDLSELSELYLDHNGISLTAKNIFKGLSRLEIIDLSSNRIAQLGDSAFNGVGATLKQLGLGNNYLGRFFSFKKSYRAFKQLANL
THLDLSNNGIYDFRSDVFRFQSNVRSLNLVGNALRDSSLFIEVHNDTDPSELKYLHRASVFHSLPSLKSVKLSHNRLTRCCEAFNGLNDLKYVDLQSNAI
SCRAATFFRWVDDSPVISDYLNWTCQQPESVIGEKFNELEFRECVQESYAYKWYLVVICLVILTVIVGIVVLKWHWHVRYKFRHFFKDDDMNIELEERKY
DAFVSYSSHDSDRVIRSLVPHLDSLQVKSCIAERDFIAGIPIAENIVASIEQSRQVILVISRNFLKSDWCKYELQMAEYKHFTTGEKYVIPILLEEIPIE
MMPKSLRYLLATKTYLEWKDGEKEEGLFWRRLGKALKANKSRSQRQEQIPIKQTGDIEVDVVARSSLSPITSPTHRSDTDDDVDVEPEKQGDHETCVKLD
NSLKETCTDDQAIDITAKGPHIDDDPSSECQTVCSDVYTENPVVEDVKLMTKARRRDLSTFFAGIVEKGRHVFFTTLFRFKYTKTSSFHHKAPPMSDSEA
TAEPFLPKVVQESYTEEHAHIACCQQEPIYQNSWFLYHATRIRTKEPLPPVPVEQDDTSLSISEPQTTVVHMAAIEQYQSPMPVYEEIPCHGYERSLVPY
GENLKELQAVQQQPRLNVVTSSLATGIFDSEGGHLVIEGTGVRLFIPPGAIKDGTEQQVTISISSDECDKPTLAEGQARISPVIRCSPHGITFQKSVALS
FPHTGETSKGKVIHPLITNTDRGQEAGYEDMRKDDGARAIVRKSDCVVFLDHFTGVTLVEKSPCPDEGAKGGSGSDDSTDKPLYAIPFWSLTSSGDVVVR
VRLCQKRDDAKQTAYGDEQACGGRPCDGPPVTLYVQVRNGTKARVQLVMDNVRPGWASVDGLEKVIDCRRIFTDDEVQQCSFLLERCSDGDGHNSNRFRC
RLQFIPEGNEDAQTTYVSVLTDEPLPLSPKQDFAVRPKRPPCLPVGARKELCRLLDPSNPLGNDWRMLSCELNLQLDSYDIQLFEEHSDKRSPTFQILTL
FELDYGHLPQVQQLHALRKVLAEPPMGRPDASRLVENVISQHFAEDGATPSVAHDHDQHCDPAASNTMSRLTGDRYYSPYAAPCAVQPKIPTATNMRPDP
LTTSSTANTSQLDDAPEETTLKKTHLPETDSDQACKQESQSTAVCTPLKVPDRNASLATSQVEDTPSHTGATASTKRMQVTKSDDELIIVEEERIRSEDD
VELLSSEDSPNWTDDKKLKKKHDVVDTHTYGDLGKECLARSRTGMHPIEEESVSLLDETD


 
May 27, 2016. last modified
 
Copyright © Laboratory of Molecular Medicine, Sun Yat-Sen University, High Education Mega Center, Guangzhou 510006 China.