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Lancelet
Branchiostoma belcheri
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 Tips for searching: search using a ID, gene name, symbols or description variable in publications and databases.
 Searching examples: IFT27, IFT, TLR, caspase, also Bb_063970F are available for query.
 

Datasets listed by species in the LanceletDB site*
 Species (Lancelet)  Datasets  Counts   Gbrowse   Example  Description and Notes
 B.belcheri  B.belcheri_v18h27.r3_alt_genome  2307 (Scaffolds) chr view The chinese lancelet genome (The alternative haploid assembly v18h27, soft-masked) 
 B.belcheri  B.belcheri_v18h27.r3_alt_cds  36552 (Transcripts) chr view The non-redundant transcript set for the alternative haploid assembly, including the annotated poly(A) sites identified by SAPAS method 
 B.belcheri  B.belcheri_v18h27.r3_alt_protein  36552 (Proteins) chr view The non-redundant protein set for the alternative haploid assembly
 B.belcheri  B.belcheri_v18h27.r3_ref_genome  2307 (Scaffolds) chr view The chinese lancelet genome (The reference haploid assembly v18h27, soft-masked) 
 B.belcheri  B.belcheri_v18h27.r3_ref_cds  37646 (Transcripts) chr view The non-redundant transcript set for the reference haploid assembly, including the annotated poly(A) sites identified by SAPAS method 
 B.belcheri  B.belcheri_v18h27.r3_ref_protein  37646 (Proteins) chr view The non-redundant protein set for the reference haploid assembly
 B.belcheri  B.belcheri_v15h11.r2_genome  3298 (Scaffolds) chr view The chinese lancelet genome (The reference haploid assembly v15h11, soft-masked)
 B.belcheri  B.belcheri_v15h11.r2_cds  36003 (Transcripts) chr view The non-redundant transcript set for the reference haploid assembly, including the annotated poly(A) sites identified by SAPAS method
 B.belcheri  B.belcheri_v15h11.r2_protein  36003 (Proteins) chr view The non-redundant protein set for the reference haploid assembly
 B.belcheri  B.belcheri_HapV2(v7h2)_genome  5679 (Scaffolds) chr view The chinese lancelet genome (The reference haploid assembly v7h2, soft-masked)
 B.belcheri  B.belcheri_HapV2(v7h2)_cds  35293 (Transcripts) chr view The non-redundant transcript set for the reference haploid assembly, including the annotated poly(A) sites identified by SAPAS method
 B.belcheri  B.belcheri_HapV2(v7h2)_proteins  35293 (Proteins) chr view The non-redundant protein set for the reference haploid assembly
 B.belcheri  B.belcheri_454EST_infected-intestine  223103 (ESTs)   view The Expressed sequences tags (ESTs) obtained by the 454-sequencer from the intestine of V.anguillarum-challenged lancelets (Xiamen, China)
     
 B.belcheri  B.belcheri_454EST_normal-intestine  170607 (ESTs)   view The ESTs obtained by the 454-sequencer from the intestine of unchallenged lancelets (Xiamen, China)
     
 B.belcheri  B.belcheri_454EST_xiamen-beihai.merged   98118 (ESTs)   view The ESTs generated by the 454-sequencer from the unchallenged lancelets (Beihai and Xiamen, China)
  ds  
 B.belcheri  B.belcheri_sangerEST_xiamen  4074 (ESTs)   view The ESTs obtained by the sanger sequencing from the unchallenged lancelets (Xiamen, China)
     
 B.belcheri  B.belcheri_r3_transposon_elements  875   view The transposon elements sequences
     
 B.tsing  B.tsing_sangerEST_qingdao  24412 (ESTs)   view The ESTs obtained by the sanger sequencing from the unchallenged lancelets (Qingdao, China)
     
 B.floridae  B.floridae_v2.allmasked#  398 (Scaffolds) chr view The Florida lancelet genome (The reference diploid assembly version 2)
     
 B.floridae  B.floridae_v2_anno.transcripts#  28667 (Transcripts) chr view The filtered gene models mapped to the genome
     
 B.floridae  B.floridae_v2_anno.proteins#  28667 (Proteins) chr view The proteins corresponding to the transcripts (B.floridae_v1_anno.transcripts)
     
 B.floridae  B.floridae_v1.allmasked#  3032 (Scaffolds) chr view The Florida lancelet genome (The reference diploid assembly version 1)
     
 B.floridae  B.floridae_v1_anno.transcripts#  50815  (Transcripts) chr view The gene models for the reference diploid assembly
     
 B.floridae  B.floridae_v1_anno.proteins#  50815 (Proteins) chr view The protein set for the reference diploid assembly
     
 B.floridae  B.floridae_ESTs_gastrula#  262037 (ESTs)   view The ESTs from the gastrula in embryogenesis
     
 B.floridae  B.floridae_mature.miRNA#  3032 (Mature miRNAs)   view The Mature miRNA sequence set from miRBASE (A published miRNA sequences and annotation database)
     
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# The publicly available data sets collected.

Augest 9, 2016. last modified
 
 
 
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